Protein ZmOrphan235
ZmOrphan235 is a protein in the Orphans family.
Information
Orphans Name: ZmOrphan235
Species: Maize
Orphans Family: Orphans
Gene Name(Synonym): CRR7
Uniprot ID: B4FKP5
Subgenome: 2

Protein ZmOrphan235

ZmOrphan235 is a protein in the Orphans family.

Overview of domains present in v5 transcripts
PF00072
Zm00001eb182130_T002
Zm00001eb182130_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d050768DAPseq no logo sequence fimo position
Zm00001d050768DAPseq no logo sequence fimo position
Zm00001d050768ChIPseq no logo sequence fimo position
Zm00001d050768PChIPseq no logo sequence fimo position

Interactions where ZmOrphan235 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmOrphan235 is the target  
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There are 149 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb182130_T002 from maize genome v5

Amino Acid Sequence
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MGQGGEVKAAPAVRVLVVDDSPVDRKVVELLLRNHNHQGGAAPFHVTAVDSGKKAMEHLRLMEQGGQLDSCAADANRITI
DIVLTDYCMPEMTGYDLLKAIKALSSPNPIPVVVMSSENEPQRISSRCLTAGAEDFILKPLKTKDVQRLRNCSSAARPRD
DAAHQCESLRRSSRKLRSDQVAAPGHRSQPTTGLTMVLHASSIELSHYFQFLLKFVLLAYAVLCLTELLHRWSNGSVLSL
WSA

MGQGGEVKAAPAVRVLVVDDSPVDRKVVELLLRNHNHQGGAAPFHVTAVDSGKKAMEHLRLMEQGGQLDSCAADANRITI
DIVLTDYCMPEMTGYDLLKAIKALSSPNPIPVVVMSSENEPQRISSRCLTAGAEDFILKPLKTKDVQRLRNCSSAARPRD
DAAHQCESLRRSSRKLRSDQVAAPGHRSQPTTGLTMVLHASSIELSHYFQFLLKFVLLAYAVLCLTELLHRWSNGSVLSL
WSA

MGQGGEVKAAPAVRVLVVDDSPVDRKVVELLLRNHNHQGGAAPFHVTAVDSGKKAMEHLRLMEQGGQLDSCAADANRITI
DIVLTDYCMPEMTGYDLLKAIKALSSPNPIPVVVMSSENEPQRISSRCLTAGAEDFILKPLKTKDVQRLRNCSSAARPRD
DAAHQCESLRRSSRKLRSDQVAAPGHRSQPTTGLTMVLHASSIELSHYFQFLLKFVLLAYAVLCLTELLHRWSNGSVLSL
WSA

MGQGGEVKAAPAVRVLVVDDSPVDRKVVELLLRNHNHQGGAAPFHVTAVDSGKKAMEHLRLMEQGGQLDSCAADANRITI
DIVLTDYCMPEMTGYDLLKAIKALSSPNPIPVVVMSSENEPQRISSRCLTAGAEDFILKPLKTKDVQRLRNCSSAARPRD
DAAHQCESLRRSSRKLRSDQVAAPGHRSQPTTGLTMVLHASSIELSHYFQFLLKFVLLAYAVLCLTELLHRWSNGSVLSL
WSA

MGQGGEVKAAPAVRVLVVDDSPVDRKVVELLLRNHNHQGGAAPFHVTAVDSGKKAMEHLRLMEQGGQLDSCAADANRITI
DIVLTDYCMPEMTGYDLLKAIKALSSPNPIPVVVMSSENEPQRISSRCLTAGAEDFILKPLKTKDVQRLRNCSSAARPRD
DAAHQCESLRRSSRKLRSDQVAAPGHRSQPTTGLTMVLHASSIELSHYFQFLLKFVLLAYAVLCLTELLHRWSNGSVLSL
WSA

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00072
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Nucleotide Sequence
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GTTTCTCTTCCCTTCTCTCTCTGCT...

GRMZM2G096171_T01 from maize genome v3


Related TFome: pUT6006

Amino Acid Sequence
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MGQGGEVKAAPAVRVLVVDDSPVDRKVVELLLRNHNHQGGAAPFHVTAVDSGKKAMEHLRLMEQGGQLDSCAADANRITI
DIVLTDYCMPEMTGYDLLKAIKALSSPNPIPVVVMSSENEPQRISRCLTAGAEDFILKPLKTKDVQRLRNCSSAARPRDD
AAHQCESLRRSSRKLRSDQVAAPGHRSQPTTGLTMVLHASSIELSHYFQFLLKFVLLAYAVLCLTELLHRWSNGSVLSLW
SA

Nucleotide Sequence
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GTTTCTCTTCCCTTCTCTCTCTGCT...

GRMZM2G096171_T02 from maize genome v3

Amino Acid Sequence
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MGQGGEVKAAPAVRVLVVDDSPVDRKVVELLLRNHNHQGGAAPFHGQRLLLLSSSLAPLSSGPFRSVWPLHSSPLLVSTT
LLGGPCTLIRDYGYA

Nucleotide Sequence
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GTTTCTCTTCCCTTCTCTCTCTGCT...

Zm00001d050768_T001 from maize genome v4

Amino Acid Sequence
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MGQGGEVKAAPAVRVLVVDDSPVDRKVVELLLRNHNHQGGAAPFHVTAVDSGKKAMEHLRLMEQGGQLDSCAADANALSS
PNPIPVVVMSSENEPQRISRCLTAGAEDFILKPLKTKDVQRLRNCSSAARPRDDAAHQCESLRRSSRKLRSDQVLHASSI
ELSHYFQFLLKFVLLAYAVLCLTELLHRWSNGSVLSLWSA

Nucleotide Sequence
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GTGCTGCGTTTCTCTTCCCTTCTCT...

Zm00001d050768_T002 from maize genome v4

Amino Acid Sequence
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MGQGGEVKAAPAVRVLVVDDSPVDRKVVELLLRNHNHQGGAAPFHVTAVDSGKKAMEHLRLMEQGGQLDSCAADANALSS
PNPIPVVVMSSENEPQRISRCLTAGAEDFILKPLKTKDVQRLRNCSSAARPRDDAAHQCESLRRSSRKLRSDQVAAPGHR
SQPTTGLTMVLHASSIELSHYFQFLLKFVLLAYAVLCLTELLHRWSNGSVLSLWSA

Nucleotide Sequence
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GTGCTGCGTTTCTCTTCCCTTCTCT...

Zm00001d050768_T003 from maize genome v4

Amino Acid Sequence
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MGQGGEVKAAPAVRVLVVDDSPVDRKVVELLLRNHNHQGGAAPFHVTAVDSGKKAMEHLRLMEQGGQLDSCAADANRITI
DIVLTDYCMPEMTGYDLLKAIKALSSPNPIPVVVMSSENEPQRISRCLTAGAEDFILKPLKTKDVQRLRNCSSAARPRDD
AAHQCESLRRSSRKLRSDQVAAPGHRSQPTTGLTMVLHASSIELSHYFQFLLKFVLLAYAVLCLTELLHRWSNGSVLSLW
SA

Nucleotide Sequence
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GTGCTGCGTTTCTCTTCCCTTCTCT...

Zm00001eb182130_T001 from maize genome v5

Amino Acid Sequence
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MGQGGEVKAAPAVRVLVVDDSPVDRKVVELLLRNHNHQGGAAPFHVTAVDSGKKAMEHLRLMEQGGQLDSCAADANRITI
DIVLTDYCMPEMTGYDLLKAIKALSSPNPIPVVVMSSENEPQRISRCLTAGAEDFILKPLKTKDVQRLRNCSSAARPRDD
AAHQCESLRRSSRKLRSDQVAAPGHRSQPTTGLTMVLHASSIELSHYFQFLLKFVLLAYAVLCLTELLHRWSNGSVLSLW
SA

Nucleotide Sequence
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GTTTCTCTTCCCTTCTCTCTCTGCT...


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